2007-05-21Ensembl API
Ensembl API for ruby (on ActiveRecord)
Jan Aerts commited a Ensembl ruby API for the http://bioruby-annex.rubyforge.org.
How to use script/example_emsembl.rb
$ENSEMBL_CORE_DATABASE = 'homo_sapiens_core_44_36f'
- Set a library path and required files.
bioruby-annex/ensembl-api% ruby -I lib -r coredb.rb -r lib/bio/api/enxembl script/example_ensembl.rb --- !ruby/object:Bio::Api::Ensembl::Core::SeqRegion attributes: name: "1" coord_system_id: "17" length: "247249719" seq_region_id: "226034" Number of simple features: 0 --- ...