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GO
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Biomart
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ActiveRecord
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UniProt
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GFF
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WebService
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EBI
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SOAPWSDL
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NCBI
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WSDL
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InterProScan
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BioSQL
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RailsPlugins
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RailsPlugin
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Ensembl
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LectureNote
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CodonTable
2006
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06
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07
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08
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09
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10
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12
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2007
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04
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05
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10
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12
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2008
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01
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04
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記事一覧
2008-04-02
[
CodonTable
]
Bio::CodonTable#revtrans(str) -> ary
2008-01-10
[
release
][
HEAD
]
H-InvDB REST web service client class added
2007-12-30
[
Release
]
BioRuby 1.2.1 released
2007-12-25
[
Release
]
bioruby CVS HEAD on ruby 1.9.0
2007-12-15
1_2_0_released*[Release] BioRuby 1.2.0 released
2007-10-10
情報技術基礎I
[
LectureNote
]
情報技術基礎I
[
LectureNote
]
プログラミング基礎I Ruby入門
[
LectureNote
]
プログラミング基礎II くりかえし、式、条件分岐、正規表現
[
LectureNote
]
プログラミング基礎III ファイル入出力
[
LectureNote
]
まとめ
2007-05-21
Ensembl API
[
Ensembl
][
ActiveRecord
]
Ensembl API for ruby (on ActiveRecord)
2007-05-03
*profiling_the_too_slow_genome_scale_embl_parsing*[EMBL] Profiling genome scale EMBL file parsi
2007-04-11
[
ActiveRecord
][
GO
][
RailsPlugin
]
GO Database on ActiveRecord plugin released.
2007-04-10
[
UniProt
][
ActiveRecord
][
RailsPlugin
]
UniProt on ActiveRecord plugin released
2007-04-08
[
ActiveRecord
][
UniProt
]
Update UniProt release 10 (6 Martch 2007) on ActiveRecord
[
RailsPlugin
]
bioruby-annex launched.
2007-04-06
BioSQL on ActiveRecord
[
ActiveRecord
][
BioSQL
]
Bio::BioSQL access module by ActiveRecord
2006-12-16
Bio::Iprscan::Report released
[
InterProScan
]
Bio::Iprscan::Report class for parsing iprscan output.
[
InterProScan
]
Reading a merged.(raw|txt) the Iprscan output.
2006-10-17
A simple solution for using two or more databases on Rails
[
ActiveRecord
]
app/models/term.rb
2006-10-16
A more transparent solution for connecting two or more databases on Rails
[
ActiveRecord
]
script/console code chunk
[
ActiveRecord
]
app/models/term.rb
[
ActiveRecord
]
app/models/entry.rb
[
ActiveRecord
]
ActiveRecord::Base.reconnection and ActiveRecord::Base._find
2006-10-15
A solution for connecting two or more databases on Rails
[
ActiveRecord
]
script/console code chunk
[
ActiveRecord
]
app/models/term.rb
[
ActiveRecord
]
app/models/entry.rb
[
ActiveRecord
]
ActiveRecord::Base.reconnection
2006-09-18
EBI WebServices on BioRuby
[
WebService
][
EBI
]
EBI WebService
[
WebService
][
EBI
][
WSDL
]
WSDL URIs
[
WebService
][
EBI
][
SOAPWSDL
]
Usage for ebi_ws.rb
[
WebService
][
EBI
][
SOAPWSDL
]
ebi_ws.rb
2006-09-17
NCBI WebService E-Utilities on BioRuby
[
WebService
][
NCBI
]
NCBI WebService E-Utilities (E-SOAP)
[
WebService
][
NCBI
][
WSDL
]
WSDL URIs
[
WebService
][
NCBI
][
SOAPWSDL
]
Usege for ncbi_ws.rb
[
WebService
][
NCBI
][
SOAPWSDL
]
ncbi_ws.rb
2006-08-29
Bio::DB::GFF on ActiveRecord
[
ActiveRecord
][
GFF
]
Rails plugin for gbrowse GFF database
2006-07-11
UniProt on ActiveRecord
[
ActiveRecord
][
UniProt
]
Modeling for UniProt/Knowledgebase Entry by ActiveRecord
[
ActiveRecord
][
UniProt
]
uniprot/Rakefile
[
ActiveRecord
][
UniProt
]
uniprot/config/database.yml
[
ActiveRecord
][
UniProt
]
uniprot/db/migrate/001_create_entries.rb
[
ActiveRecord
][
UniProt
]
uniprot/app/models/entry.rb
2006-06-21
GO Database on ActiveRecord
[
GO
][
ActiveRecord
]
New Term Model
[
GO
][
ActiveRecord
]
Unit Test Code for Term Model: test_term.rb
2006-06-20
GO Database on ActiveRecord
[
GO
][
ActiveRecord
]
New GeneProduct Model
[
GO
][
ActiveRecord
]
Example codes for the new GeneProduct model
2006-06-17
Biomart on ActiveRecord
[
Biomart
][
ActiveRecord
]
Biomart on ActiveRecord #1
2006-06-16
GO Database on ActiveRecord
[
GO
][
ActiveRecord
]
GO Database Example Queries #1
[
GO
][
ActiveRecord
]
Modeling GO Database #1
[
GO
]
Makefile for GO Database installation.
2006
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09
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10
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2007
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04
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05
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2008
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01
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